Insertion junction: CLIP2.047783_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047783
Chromosome:chromosome 6
Location:7666349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302200 EFH3 (1 of 1) PF13202//PF14252 - EF hand (EF-hand_5) // Domain of unknown function (DUF4347) (DUF4347); EF-hand Calcium binding protein with DUF4346 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAAAGCCTGGAGCTCTGGCACCCGTGGCCCTCACCCGCACCCCACAA
Internal bar code:CCGGGTATAAGGGCGCCAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1507
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGACTCGCTCGACATATGGC
Suggested primer 2:ACGATGCTGACGGCGATAAT