Insertion junction: CLIP2.047800_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047800
Chromosome:chromosome 3
Location:3530062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167600 CaM-IP3,FAP61 (1 of 1) PF16092 - Domain of unknown function (DUF4821) (DUF4821); Flagellar Associated Protein 61 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCAGTGTGAGGTAGTTGAACTGCAGCTCGGGGTCCAGCAGCAGCCGC
Internal bar code:CGGACATCATGGGTAGCGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2942
LEAP-Seq percent confirming:62.069
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACTTCGGGCTCTCCAAT
Suggested primer 2:GTATAGGAGCAGCGCGACAT