Insertion junction: CLIP2.047809_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047809
Chromosome:chromosome 6
Location:3279408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277250 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGCAAGGCGGTTTGGAAAACACGACAAATGCATCAGTGCGACAGGAG
Internal bar code:GTAATCCTCTGAAAACGCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4472
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGCCCTCTGACATGCAG
Suggested primer 2:CCTGCTGGCCCCAATCTTTA