Insertion junction: CLIP2.047817_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047817
Chromosome:chromosome 12
Location:2328891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508150 SRH21 (1 of 1) PTHR10799//PTHR10799:SF691 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // MYB DOMAIN-CONTAINING PROTEIN-RELATED; SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTACACATGCCCACGCCAATACCAAGCTGGCGAGCACGTCACCATCAC
Internal bar code:GTAGGGGAGAGGGTAGCGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATGCCTCGAAAGCACAA
Suggested primer 2:CGCATGATCGACATCCTGGA