Insertion junction: CLIP2.047824_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047824
Chromosome:chromosome 13
Location:2578274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580550 HLM20 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); putative N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGAACTGAACTGGTGAAACAATTGCGGGAGCAAGCCTGCAACAGTTT
Internal bar code:CGGCTGCTTTTGACCAAAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1188
LEAP-Seq percent confirming:83.6735
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGAGTCAATGCCGATGT
Suggested primer 2:ACGAGGCAAAACTCCTGGAG