Insertion junction: CLIP2.047828_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047828
Chromosome:chromosome 12
Location:5767856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532650 (1 of 1) PTHR21394:SF0 - MAU2 CHROMATID COHESION FACTOR HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGGGGGCATGTGCGTGACTGGTTAAGTGGTTAGGAGGCGGCCAGGTC
Internal bar code:TTAATCCATGTACGTCATCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1803
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTGGGGTCTCTGTGTG
Suggested primer 2:ATCCCCTAGTCCTGCACCAT