Insertion junction: CLIP2.047830_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047830
Chromosome:chromosome 11
Location:4344020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482750 (1 of 239) IPR016024 - Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTTTGCAGGTTGCCAAGGCTTGCCAGGACAGTGGAACCGATGCTGCA
Internal bar code:CCCAGTTGGTGAGTATAGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1397
LEAP-Seq percent confirming:37.2881
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGCTTTCAATGCGGTG
Suggested primer 2:GAGGAGGTTTGGAGGGTTGG