Insertion junction: CLIP2.047830_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047830
Chromosome:chromosome 11
Location:4344024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482750 (1 of 239) IPR016024 - Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATATCAAATACTTTGTCCAATACTACCACGGTGCTGTTTGCGTGACC
Internal bar code:CCCAGTTGGTGAGTATAGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGGTTTGGAGGGTTGG
Suggested primer 2:TGTTGGCTTTCAATGCGGTG