Insertion junction: CLIP2.047830_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047830
Chromosome:chromosome 16
Location:3288433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666302 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGCGGGCGGCTGGCTGGGCGATGGATGGGTCGCTGGGTGGCGTCTCA
Internal bar code:GGATTCACGCATCTTGTCATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3653
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACAGTTGTCAACAGCC
Suggested primer 2:GTACATAACAGCACGCGCAG