Insertion junction: CLIP2.047831_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047831
Chromosome:chromosome 1
Location:6930620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049750 (1 of 1) PTHR12714:SF11 - C-TERMINAL S-ISOPRENYLCYSTEINE CARBOXYL O-METHYLTRANSFERASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCAGCTCGGCCGCTTGGCCACAAAATTACAAGCAGCAGGCGACAAG
Internal bar code:TCTTGTTTGTGTTTGTAAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1848
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCGTTTAACTGGAGCCA
Suggested primer 2:AACACGAATTTCTCCGGGCT