Insertion junction: CLIP2.047834_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047834
Chromosome:chromosome 12
Location:1967448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAATGCGCTTTTCGGCGTTGCTGCCCATTGCACCACTCCAGAGAGAGG
Internal bar code:GTCGTGAATGGACGATTAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1044
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGAGAGTGCCCCCATAT
Suggested primer 2:GCCTACGCACCTGCTATGAT