Insertion junction: CLIP2.047835_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047835
Chromosome:chromosome 2
Location:8469456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142100 intron
lncRNA_TCONS_00137062 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGGTGCCCGGCCGCTCCGCTAACCGCTCACGCACCCCGAACTCCCCC
Internal bar code:TACACAGGATAGAAGTTTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:467
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTACACACACACGCACACAC
Suggested primer 2:ACTGCTTCGCTTGGATGACA