Insertion junction: CLIP2.047836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047836
Chromosome:chromosome 16
Location:4398883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668400 (1 of 1) PTHR23354//PTHR23354:SF72 - NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED // PROTEIN LMD-3, ISOFORM A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAAGCTGACGACCAGCGCCACCACCACGGGCGGCGGCACGGCGCTGG
Internal bar code:ATAAGCACTCATTACCGTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:910
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGCGCGTAATGTTTTCC
Suggested primer 2:CTGTAATGCTTCGCACCTGC