Insertion junction: CLIP2.047846_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047846
Chromosome:chromosome 3
Location:4602389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176651 MYSM1 (1 of 1) PF00249//PF01398 - Myb-like DNA-binding domain (Myb_DNA-binding) // JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB); Histone H2A deubiquitinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGTGGCGCCGCTGAGCAGCGCCTGGAAGCCGCCCAGAGGCGCGCCGC
Internal bar code:GAGTAAGCTATTAGATGAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1363
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACTCTATGGAACCTCCC
Suggested primer 2:ACACAACATCCACTCCCGAC