Insertion junction: CLIP2.047847_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047847
Chromosome:chromosome 2
Location:6522186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389000 (1 of 1) PTHR23012:SF61 - AT07234P-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGCGGCTGAGTCAGGGGCGCTGTGAACAGTCGTCCACAGCCCCTGCA
Internal bar code:TTAGTGGAATTCAAGTTCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:749
LEAP-Seq percent confirming:35.5556
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGTCTCGGGCAGGACAG
Suggested primer 2:CTAAATGAATGCACGGCCGG