Insertion junction: CLIP2.047848_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047848
Chromosome:chromosome 16
Location:7372081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679893 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTGGTCATGGCTGCAGGGGACTCTGGACTTTTACGTGCATCAGGTC
Internal bar code:AGGTCCGGTTTCATGTGGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2569
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACTCCTTCGTTCATCCA
Suggested primer 2:ATCCACATGGCTTGGGAAGG