Insertion junction: CLIP2.047850_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047850
Chromosome:chromosome 17
Location:3794493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726950 (1 of 1) PTHR11042//PTHR11042:SF102 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED // INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED PROTEIN KINASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACGGAGGCTGGCCAGCTGCGCCGTCGTGACGCCGGAGGGATGGGCAG
Internal bar code:TCGAGTCGGTCTGAACAGTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1634
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCGTGATCTCGTCTGC
Suggested primer 2:CGTTAATGCTGATGGTGCGG