Insertion junction: CLIP2.047856_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047856
Chromosome:chromosome 12
Location:2241776
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508650 (1 of 2) PF02010 - REJ domain (REJ) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGTTGCTGGGCAGCAGTGCGGCCGGCAGCGTCAGCACACGCACGGC
Internal bar code:CCGTCTGGTAAGGTTTCAACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1206
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATCACAGTCACCGTGTC
Suggested primer 2:AAGGACATCAGGTTGGCGAG