Insertion junction: CLIP2.047861_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047861
Chromosome:chromosome 15
Location:799457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637750 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAACGGCTGGGCCTGCAACAGCTCCTGCTGCTGCCGCGGTCGCTTGTCG
Internal bar code:CGACTTCCCGGATGCGGTAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:658
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCATCCTTCTCCTCCCCA
Suggested primer 2:CATCCAGTATCTCACGGGCC