Insertion junction: CLIP2.047861_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047861
Chromosome:chromosome 15
Location:799464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637750 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCTGGTTTGTGGCGGTTGGGTTTGTGCAGCCGGCGGCAGCGGTGGCG
Internal bar code:CGACTTCCCGGATGCGGTAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCAGTATCTCACGGGCC
Suggested primer 2:CTCCATCCTTCTCCTCCCCA