Insertion junction: CLIP2.047873_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047873
Chromosome:chromosome 12
Location:2502244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507200 (1 of 2) IPR000104//IPR003613 - Antifreeze protein, type I // U box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTTCCGCTCAGGGACCTCAACACCAGCCACGTCATCCTGCAGCTTCA
Internal bar code:GGGCTTCCGTTGGATCGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAACCCTCGTCACACCAC
Suggested primer 2:ATGTGGTGTCGTACATCGGG