Insertion junction: CLIP2.047875_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047875
Chromosome:chromosome 6
Location:1143620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g257900 (1 of 1) K10088 - protein OS-9 (OS9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGGCACCGACGTCGATGCAGCTGAGGATTTTACAGGGCCACCGGTCG
Internal bar code:TGGGTTTCGACGGCGGTCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAAAAGCTCACTGGTGG
Suggested primer 2:GTCTTTGTTGTCACCACGCC