Insertion junction: CLIP2.047890_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047890
Chromosome:chromosome 3
Location:6253061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCTGCCTTTTGATGAACTGGTGCAGGAAGTTGGCAGTAGCAGCGGCA
Internal bar code:ACTGGTCCACCACGGATTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1487
LEAP-Seq percent confirming:17.1875
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGCTTTCACTGCTTTT
Suggested primer 2:CATGCGACGCACACACTATG