Insertion junction: CLIP2.047890_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047890
Chromosome:chromosome 3
Location:6253065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGGTGAAAACATGGTGAGTCCCTTGCCCAGCTTGGAGCTCAAGTCCG
Internal bar code:CGCATCGGCCAGATACGGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGACGCACACACTATG
Suggested primer 2:CCGCTGCTTTCACTGCTTTT