Insertion junction: CLIP2.047895_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047895
Chromosome:chromosome 1
Location:2537932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015050 AGK1 (1 of 1) IPR006569//IPR017956//IPR020478 - CID domain // AT hook, DNA-binding motif // AT hook-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGCCTGGGCTGCGGCACCATTGCTTGGCCCGCACGGGAATGCCGCCC
Internal bar code:ACGGGGCATGATGGACATTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5250
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGCCATCGAAAGCTTT
Suggested primer 2:CCCCTGTTGATGTCAGTCCC