Insertion junction: CLIP2.047907_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047907
Chromosome:chromosome 12
Location:3232728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499700 MFT3,MAE3 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGAGGTGGTGGAAGAGCCAGGCCGGGTGGTCTGACAACTGGATACCC
Internal bar code:TTTACCACAGTATCGAAGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:476
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGACGTGCGCAAGTAAGA
Suggested primer 2:CTAGGCTGTGGAGGGAAAGC