Insertion junction: CLIP2.047910_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047910
Chromosome:chromosome 5
Location:177590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242650 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTGCCAAGCGCGAGCGCGACCGGACGGGGGGCGGTGCTGATGAGGTG
Internal bar code:CTGGTGGCGTCATCTACTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1320
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTTACAGTCGCTGCTGCAAC
Suggested primer 2:TGTCCAAGCTGCCCATGATT