Insertion junction: CLIP2.047912_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047912
Chromosome:chromosome 3
Location:6441992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193200 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGCGCACACGCACACAAGGGCCGTAGCGACCAGTACGCGTTCATGCA
Internal bar code:AGCTTAAATTTAGGGGCAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4426
LEAP-Seq percent confirming:91.5254
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCGAGGAGGTCAAGGCG
Suggested primer 2:CCGTAGCTACTCGCGTACAG