Insertion junction: CLIP2.047912_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047912
Chromosome:chromosome 3
Location:6443216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193200 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR
Cre03.g193250 (1 of 1) 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCAAGGATCTTATGAAGGCGGACCAGACTGTGTAAAATTCAATATTGG
Internal bar code:GGAGGATTCGGGTTGGTCCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2544
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGGCTGGTTCTTGAGAT
Suggested primer 2:ACGTTTGGTGGTCAGCATCA