Insertion junction: CLIP2.047914_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047914
Chromosome:chromosome 14
Location:2003326
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g620951 (1 of 1) PTHR21496//PTHR21496:SF8 - FERREDOXIN-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAATGCACCGCACGGACTTCCATGTAATGCACCGCACGGACTTCCATG
Internal bar code:GAGTAATAATGGGGTGTAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCTTAAGAGTCAGAGCC
Suggested primer 2:ACCGTGTCTGCAAGGAGAAG