Insertion junction: CLIP2.047922_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047922
Chromosome:chromosome 8
Location:2908004
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374350 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGATGCTTTCATGTTGATGGCGAACGCAGGTCCGTCTGCAAAGCTGTA
Internal bar code:GTTTTCGGAACCCTTGTTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1484
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTGTGCTTGCCTTCCCC
Suggested primer 2:CCCTAGGCGTTTCCACAACT