Insertion junction: CLIP2.047943_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047943
Chromosome:chromosome 12
Location:7537383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556400 (1 of 1) K08066 - nuclear transcription factor Y, gamma (NFYC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTGGCAAGCACAGCTGGTCGAGGTGTCTGAGGTCCCACCTGACCCAA
Internal bar code:GGCTTGTTAGAGCGAAGTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:951
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTGTGCCGTAGTTGGAG
Suggested primer 2:GTCCTGGCACGGTGATACAA