Insertion junction: CLIP2.047943_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047943
Chromosome:chromosome 12
Location:7537385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556400 (1 of 1) K08066 - nuclear transcription factor Y, gamma (NFYC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAGCGCCTCAGCTTGGTGGTGGTTCGGCGGGATTCCACCAGTGTACC
Internal bar code:CATAAAGCGTAGCCGAGTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2809
LEAP-Seq percent confirming:84.9057
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTGGCACGGTGATACAA
Suggested primer 2:ACTGTGTGCCGTAGTTGGAG