Insertion junction: CLIP2.047945_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047945
Chromosome:chromosome 17
Location:3425635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTCGGCGGCCTCAGACATTGCACCGTGGCGTGGGCGCAGCCCCAGTG
Internal bar code:CGGTTAGGTATCGACTGTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3289
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTGGGTGTCAGGCCAAA
Suggested primer 2:TCAAGAACGAGCTGCGAACT