Insertion junction: CLIP2.047949_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047949
Chromosome:plastome
Location:9885
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGCTTTGGGAGCATAGGGTCGCAGGTTCGAATCCTGTCATCCCGATA
Internal bar code:ACGTCGGGAACGTATACTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:97
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAACATTCGCGTACCCGT
Suggested primer 2:TGCTACACATTCAGCTGCCA