Insertion junction: CLIP2.047951_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047951
Chromosome:chromosome 3
Location:4441121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800331 intron
lncRNA_TCONS_00070774 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCATAATCCGTGGACTGTCAGACAGTCAAACCCCAGGGACCGCTCCCA
Internal bar code:CGATCTATAGCAGACCACCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4433
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCATAGGGTTACAGCGCA
Suggested primer 2:CTCAACTTGCACCCAACACG