Insertion junction: CLIP2.047954_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047954
Chromosome:chromosome 5
Location:2696105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre36.g759647 (1 of 4) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACATACCTGGCTGCTCCGCAGCGCCTGTCCCCGGCCGCTTGCAACTTG
Internal bar code:GATGGTAGAAAATATAAACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1688
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTGTATGTCGTTGGTGG
Suggested primer 2:TGGGTGGAGTATGAGGAGGG