Insertion junction: CLIP2.047960_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047960
Chromosome:chromosome 2
Location:2237055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089900 SCM1,SCAMP5 (1 of 1) PTHR10687 - SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP; secretory carrier membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCGCCCCATGGCTTGCTGCACCCGCCGCCGCGCGCCGCTGTGCGAGT
Internal bar code:CTAGGTGATGTGTTGGACTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1017
LEAP-Seq percent confirming:97.5309
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAACTACAAGCCAACGC
Suggested primer 2:AGACGGAAGGCAATCTTGGG