Insertion junction: CLIP2.047976_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047976
Chromosome:chromosome 2
Location:2736242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGAGACGACCCCAGAAGTCAGCTACGACGGCAAGTCCAATGCTCAG
Internal bar code:GAACACATAACTGGGGTGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2455
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGTCGAAGGTGAAGCGT
Suggested primer 2:CGACTTTGCTGCAAACCCTC