Insertion junction: CLIP2.047979_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047979
Chromosome:chromosome 1
Location:6345275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044900 (1 of 5) PTHR10351:SF42 - LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGAAGACCCCGGCTCAAACCCGGGTAGGGACACTTTTGCAATTGGTT
Internal bar code:CTGTTCGCTATGTTACGGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1264
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTGCACGTGTCCATTG
Suggested primer 2:GGTCAGTGCGTGAAGTGAGA