Insertion junction: CLIP2.047979_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047979
Chromosome:chromosome 1
Location:6345293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044900 (1 of 5) PTHR10351:SF42 - LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACTATACGATAGGGACGATTCGAAGAACCTTAGACGGGTGGTCATGC
Internal bar code:ACACAGAGACGACTCCGCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3451
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCAGTGCGTGAAGTGAGA
Suggested primer 2:TTGCTTGCACGTGTCCATTG