Insertion junction: CLIP2.047980_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047980
Chromosome:chromosome 6
Location:5078857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282450 PFH18,PHX11 (1 of 1) PTHR10869//PTHR10869:SF91 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED; Putative prolyl 4-hydroxylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGCCACCACCGGCTGCGGCCCCGCTGGCGCCACGTCCACCTCGCCG
Internal bar code:CTACAACTCCTGCTGCAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:502
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCAGATGCTCGGTGGCA
Suggested primer 2:GTCTCCACCAGCGTTACACA