Insertion junction: CLIP2.047988_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047988
Chromosome:chromosome 2
Location:3698711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100450 CYG20 (1 of 5) IPR000104//IPR001054//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCGCGGCGACGGCAGTGAGGACGAGCTTCACGCGCTCAAGGTGCTT
Internal bar code:TTATTAATTCCGTTGTTTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGGTTTGATCCCGCCAG
Suggested primer 2:CTTCACTCGTGGCTCGTTCT