Insertion junction: CLIP2.047991_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047991
Chromosome:chromosome 12
Location:8513184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549400 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCGCACCCCAGGAGCCGGCCGGCTCCCCCCGCGACCTGTCCGCCTAC
Internal bar code:TTTTGCCAACGAGATCTTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:85
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGAAGGTCAGACCAGG
Suggested primer 2:CAAGAACTCTGTCGGCGTCT