Insertion junction: CLIP2.047992_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047992
Chromosome:chromosome 2
Location:1626102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085150 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGCAGTTACCATGACCGCATGTTCTTTTCCCCTCCTCACCTGTAGTG
Internal bar code:TCTTCATAATATACTCAGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCGCGACACCCATATCA
Suggested primer 2:TTAGTACGGGCGCACGATAC