Insertion junction: CLIP2.048000_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048000
Chromosome:chromosome 3
Location:614263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145487 (1 of 5) IPR001841//IPR013083 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAGCACGCCGGGAGGCATAGTTATGCACAACCAACACTGGGAGGCCC
Internal bar code:ACATCGGATCAGTTGGGATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2159
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGAAGCGAGTAGTCCCA
Suggested primer 2:CTGCGCTTTTCGGTGTTGAA