Insertion junction: CLIP2.048002_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048002
Chromosome:plastome
Location:102974
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802309 2716996,petG,ChreCp045 (1 of 1) K02640 - cytochrome b6-f complex subunit 5 (petG); cytochrome b6/f complex subunit V 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACTTAAGGTATAGAAATATAAACAAGCATCCCGAAGAAAAAAGGGGT
Internal bar code:CTAAAGTTGCCCTAGAGGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:448
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGCCATTTCAAGGTGCA
Suggested primer 2:GCCACTGCCGTCCTAAGTAA