Insertion junction: CLIP2.048004_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048004
Chromosome:chromosome 3
Location:774542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146107 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCGCCGCGTAGCCAGGCACAGCTACTTCTGAAGCATTTTTGCCGCGC
Internal bar code:TCCGAGGAATAAAAGTAAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1590
LEAP-Seq percent confirming:87.1795
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTATCTGTCCAGAGCGAC
Suggested primer 2:GGCTGTGCTGAGTTCTGAGT