Insertion junction: CLIP2.048013_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048013
Chromosome:chromosome 1
Location:4359508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029600 (1 of 3) 1.11.2.3 - Plant seed peroxygenase / Soybean peroxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATCACTTCGTTCTCCACATGATGACATGAACGGCTACCCCCCACCCA
Internal bar code:AGGTATTGTCGGATATGTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2104
LEAP-Seq percent confirming:95.9459
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCTGAACCCGAACCTGC
Suggested primer 2:TGCGTGTCCCATTCCACTAC