Insertion junction: CLIP2.048022_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048022
Chromosome:chromosome 1
Location:6084292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043050 SNR2 SNARE-associated Golgi protein; (1 of 2) PTHR12677:SF5 - TVP38/TMEM64 FAMILY MEMBRANE PROTEIN YDJX CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCTCGCCATCCATCAGCGCCGCCTTGCCCAGGTGGCCAGTGGTGAC
Internal bar code:GCACGTTGTTGGTCGTGGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1533
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAAGCCATTGCACGGAAC
Suggested primer 2:TTACCGTTGCCGTTACTGCT